H3 Chemistry 9813 · Study focus: H3 Chemistry: Identify a molecular-ion peak
H3 Chemistry: Identify a molecular-ion peak
Start from the governing chemical model, test it against evidence, then transfer the reasoning to an unfamiliar case.
Your success criteria
- Identify a molecular-ion peak
- Use named chemical evidence.
- Transfer the governing reason to an unfamiliar case.
Find the intact formula mass
A molecular ion is the intact molecule after one-electron removal, M+•.
For C4H10O its nominal m/z is74 when singly charged.
Distinguish parent from fragments
The molecular ion retains every atom; m/z59 and31 in a C4H10O spectrum are fragments.
The highest abundant peak need not be M+•.
M+1 is an isotopic partner of M, not a second molecular formula.
For a chlorine compound, M+2 can be an isotope partner rather than the parent.
Text alternative: Text gives formula, m/z, intensity and role.
Use isotope satellites correctly
M+1 is an isotopic partner of M, not a second molecular formula.
For a chlorine compound, M+2 can be an isotope partner rather than the parent.
Assign C4H10O
Peaks31,59,74 include M+• at74 because its nominal mass matches the formula.
Peak31 may be CH2OH+ but cannot be the intact parent.
- Choose the parent.
Open the feedback checkpoint after attempting
- Credit full formula mass and intact-ion definition.
Reject a contaminant
A small peak at m/z91 cannot be M+• for supplied C5H10O, Mr86.
Check calibration/contamination instead of choosing the largest m/z blindly.
- Evaluate m/z91.
Open the feedback checkpoint after attempting
- Credit formula mismatch.
Recognise weak parent
A weak m/z86 peak in a C5H10O spectrum can still be M+• while m/z43 is base peak.
Intensity reports abundance, not intactness.
- Assign both roles.
Open the feedback checkpoint after attempting
- Credit86 parent and43 fragment.
Repair highest-peak rule
An isotope satellite or contaminant can lie above M; rapid fragmentation can make M weak.
Formula, cluster spacing and plausible fragments decide the parent.
- Repair: ‘highest m/z is always M.’
Open the feedback checkpoint after attempting
- Require at least two counterexamples.
Cross-check the whole spectrum
For C5H10O, M+•86 and losses to71 (−15) and43 support a coherent assignment.
Next: isotope patterns at /learning/h3-mass-spectrometry-isotope-patterns-lesson.html.
- Audit the assignment.
Open the feedback checkpoint after attempting
- Credit formula mass and plausible lower fragments.